PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Vang11g10290.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Vigna
Family ERF
Protein Properties Length: 56aa    MW: 6137.07 Da    PI: 10.6122
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Vang11g10290.1genomeSNUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2224.1e-072253255
             AP2 32 slgkfgtaeeAakaaiaarkkleg 55
                    +lg+f+tae A +a+++a ++++g
  Vang11g10290.1  2 WLGTFDTAEAAVRAYDEATLRFKG 25
                    9*****************999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.62E-10135IPR016177DNA-binding domain
CDDcd000188.32E-14135No hitNo description
Gene3DG3DSA:3.30.730.104.3E-15134IPR001471AP2/ERF domain
PROSITE profilePS5103213.182133IPR001471AP2/ERF domain
SMARTSM003800.0013139IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 56 aa     Download sequence    Send to blast
MWLGTFDTAE AAVRAYDEAT LRFKGNKAKL NFPENVIVVR PPPSRFSGNL TLGLR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150413e-60AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013616576.15e-17PREDICTED: ethylene-responsive transcription factor ABR1-like
SwissprotQ9FGF81e-17ABR1_ARATH; Ethylene-responsive transcription factor ABR1
TrEMBLA0A078IAC05e-17A0A078IAC0_BRANA; BnaC02g43290D protein
TrEMBLA0A0D3AYQ85e-17A0A0D3AYQ8_BRAOL; Uncharacterized protein
STRINGBra037794.1-P3e-16(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49193253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64750.18e-19ERF family protein